350 руб
Журнал «Технологии живых систем» №6 за 2011 г.
Статья в номере:
ИК-спектроскопическое определение белков и их комплексов в виде тонких пленок
Ключевые слова: ИК-спектроскопия белков цитохром с гемоглобины альбумины пленки
Авторы:
Елена Анатольевна Костина - студентка, химический факультет, кафедра аналитической химии, Московский государственный университет (МГУ) им. М.В. Ломоносова Михаил Алексеевич Проскурнин - д.х.н., доцент, химический факультет, кафедра аналитической химии, МГУ им. М.В. Ломоносова. E-mail: Michael@analyt.chem.msu.ru Анастасия Дмитриевна Хрычева - мл. науч. сотрудник, химический факультет, аналитический центр, МГУ им. М.В. Ломоносова Елена Васильевна Проскурнина - к.х.н., доцент, кафедра медицинской биофизики, факультет фундаментальной медицины, МГУ им. М.В. Ломоносова. E-mail: proskurnina@gmail.com Юрий Андреевич Владимиров - академик РАМН, д.б.н., профессор, зав. кафедрой медицинской биофизики, факультет фундаментальной медицины, МГУ им. М.В. Ломоносова. E-mail: yuvlad@gmail.com
Аннотация:
Предложена методика ИК-спектроскопического определения белков (на примере альбуминов и гемовых белков), основанная на получении твердых пленок на поверхности CaF2, при сохранении белка в нативном состоянии.
Страницы: 43-50
Список источников
  1. Gillie J.K., Hochlowski J., Arbuckle-Keil G.A. Infrared spectroscopy // Analytical Chemistry. 2000. V. 72. № 12. P. 71R-79R.
  2. Jilie K., Shaoning, Y. Fourier transform infrared spectroscopic analysis of protein secondary structures // Acta Biochem. Biophys. Sin. 2007. V. 39.№ 8. P. 549-559.
  3. Movasaghi Z., Rehman S., Rehman I.U. Fourier transform infrared (ftir) spectroscopy of biological tissues // Applied Spectroscopy Reviews. 2008. V. 43.№ 2. P. 134-179.
  4. Huber W., Bubendorf A., Grieder A., Obrecht D. Monitoring solid phase synthesis by infrared spectroscopic techniques // Analytica Chimica Acta. 1999. V. 393.№ 1-3. P. 213-221.
  5. Thompson L.A., Ellman J.A. Synthesis and applications of small molecule libraries // Chemical Reviews. 1996. V. 96.№ 1. P. 555-600.
  6. Larsen B.D., Christensen D.H., Holm A., Zillmer R., Nielsen O.F. The merrifield peptide-synthesis studied by near-infrared fourier-transform raman-spectroscopy // Journal of the American Chemical Society. 1993. V. 115.№ 14. P. 6247-6253.
  7. Kostewa S., Paarmann, Ch., Goeman, W., Heise, H.M. Multivariate determination of hematocrit in whole blood by attenuated total reflection infrared spectroscopy. AIP Conf. Proc. 1998. P. 271-273.
  8. Proc. Spie-int. Soc. Opt. Eng. Naumann D., Infrared Spectroscopy. A New Tool in Medicine.1998. P. 245-257.
  9. Christ A., Szurkowski J., Hanh B.D., Wartewig S., Kopycinska M., Neubert R.H.H., Cobet U. Drug penetration into a membrane investigated by photoacoustic and ftir-atr spectroscopy // Analytical Sciences. 2001. V. 17. P. S371-S373.
  10. Schendzielorz A., Hanh B.D., Neubert R.H.H., Wartewig S. Penetration studies of clotrimazole from semisolid formulation using step-scan ft-ir photoacoustic spectroscopy // Pharmaceutical Research. 1999. V. 16. №1. P. 42-45.
  11. Казицына Л.А. К.Н.Б. Применение УФ, ИК, ЯМР и масс-спектроскопии в органической химии. М.: Изд-во МГУ. 1979.
  12. Сильверстейн Р. Б.Г., Моррил Т. Спектрометрическая идентификация органи­ческих соединений. М.: Мир. 1977.
  13. Sonoyama M., Shoda K., Katagiri G., Ishida H. Amplitude spectrum approach in dynamic ft-ir spectroscopy of uniaxially oriented poly(ethylene terephthalate) films .1. Draw ratio dependence // Applied Spectroscopy. 1997. V. 51. № 3. P. 346-349.
  14. Sonoyama M., Shoda K., Katagiri G., Ishida H., Nakano T., Shimada S., Yokoyama T., Toriumi H. Amplitude spectrum analysis of dynamic ft-ir spectra of uniaxially drawn poly(ethylene terephthalate) film with a variable-temperature polymer stretcher // Applied Spectroscopy. 1997. V. 51.№ 4. P. 598-600.
  15. Baldauf N.A., Rodriguez-Romo L.A., Yousef A.E., Rodriguez-Saona L.E. Differentiation of selected salmonella enterica serovars by fourier transform mid-infrared spectroscopy // Applied Spectroscopy. 2006. V. 60. № 6. P. 592-598.
  16. Belikov A.V., Altshuler, Gregory B., Moroz, Boris T., Pavlovskaya, Irina V. Investigation of ir absorption spectra of oral cavity bacteria // Proc. SPIE V. 2922. P. 113-118.
  17. Bordner R.H., Kabler P.W., Kenner B.A., Riddle J.W., Rockwood S.W., Stevenson H.J. Bacterial identification by infrared spectrophotometry // J. Bacteriol. 1956. V. 72.№ 5. P. 593-603.
  18. Bosch A., Minan A., Vescina C., Degrossi J., Gatti B., Montanaro P., Messina M., Franco M., Vay C., Schmitt J., Naumann D., Yantorno O. Fourier transform infrared spectroscopy for rapid identification of nonfermenting gram-negative bacteria isolated from sputum samples from cystic fibrosis patients (vol 46, pg 2537, 2008) // Journal of Clinical Microbiology. 2008. V. 46.№ 12. P. 4118-4118.
  19. Filip Z., Hermann S., Demnerova K. Ft-ir spectroscopic characteristics of differently cultivated escherichia coli // Czech Journal of Food Sciences. 2008. V. 26.№ 6. P. 458-463.
  20. Grasso E.M., Yousef A.E., Rodriguez-Romo L.A., Rodriguez-Saona L.E. Rapid differentiation of bacillus strains using hydrophobic grid membranes and attenuated total reflectance infrared microspectroscopy // Journal of Food Protection. 2009. V. 72.№ 9. P. 1909-1915.
  21. Kouji I., Jun-ichi, I., Kiyoshi, Sh., Yoshiharu, S., Makiko, O., Takehisa, D., Mamoru, N Near-ir absorption and fluorescence spectra and afm observation of the light-harvesting 1 complex on a mica substrate refolded from the subunit light-harvesting 1 complexes of photosynthetic bacteria rhodospirillum rubrum // Langmuir. 2005. V. 21. № 7. P. 3069-3075.
  22. Hanh B.D., Neubert R.H.H., Wartewig S., Lasch J. Penetration of compounds through human stratum corneum as studied by fourier transform infrared photoacoustic spectroscopy // Journal of Controlled Release. 2001. V. 70.№ 3. P. 393-398.
  23. Notingher I., Imhof R.E. Mid-infrared in vivo depth-profiling of topical chemicals on skin // Skin Research and Technology. 2004. V. 10.№ 2. P. 113-121.
  24. Hanh B.D., Neubert R.H.H., Wartewig S., Christ A., Hentzsch C. Drug penetration as studied by noninvasive methods: Fourier transform infrared-attenuated total reflection, fourier transform infrared, and ultraviolet photoacoustic spectroscopy // Journal of Pharmaceutical Sciences. 2000. V. 89.№ 9. P. 1106-1113.
  25. Mark J., Karner M., Andre M., Rueland J., Huck C.W. Online process control of a pharmaceutical intermediate in a fluidized-bed drier environment using near-infrared spectroscopy // Anal. Chem. 2010. V. 82.№ 10. P. 4209-4215.
  26. Mark J., Karner M., Andre M., Rueland J., Huck C.W. Online process control of a pharmaceutical intermediate in a fluidized-bed drier environment using near-infrared spectroscopy // Anal. Chem. 2010. V. 82.№ 10. P. 4209-4215.
  27. Wang H.P., Wang H.C., Huang Y.J. Microscopic ftir studies of lung cancer cells in pleural fluid // Science of the Total Environment. 1997. V. 204.№ 3. P. 283-287.
  28. Eckel R., Huo H., Guan H.W., Hu X., Che X., Huang W.D. Characteristic infrared spectro­scopic patterns in the protein bands of human breast cancer tissue // Vibrational Spectro­scopy. 2001. V. 27.№ 2. P. 165-173.
  29. Sukuta S., Bruch R. Factor analysis of cancer fourier transform infrared evanescent wave fiberoptical (ftir-few) spectra // Lasers in Surgery and Medicine. 1999. V. 24.№ 5. P. 382-388.
  30. Choo L.P., Mansfield J.R., Pizzi N., Somorjai R.I., Jackson M., Halliday W.C., Mantsch H.H. Infrared-spectra of human central-nervous-system tissue - diagnosis of alzheimers-disease by multivariate analyses // Biospectroscopy. 1995. V. 1.№ 2. P. 141-148.
  31. Fujioka N., Morimoto Y., Arai T., Kikuchi M. Discrimination between normal and malignant human gastric tissues by fourier transform infrared spectroscopy // Cancer Detection and Prevention. 2004. V. 28.№ 1. P. 32-36.
  32. Fujioka N., Morimoto Y., Arai T., Takeuchi K., Yoshioka M., Kikuchi M.Differences between infrared spectra of normal and neoplastic human gastric cells // Spectroscopy-an International Journal. 2004. V. 18.№ 1. P. 59-66.
  33. Fukuyama Y., Yoshida S., Yanagisawa S., Shimizu M. A study on the differences between oral squamous cell carcinomas and normal oral mucosas measured by fourier transform infrared spectroscopy // Biospectroscopy. 1999. V. 5.№ 2. P. 117-126.
  34. Mossoba M.M., Al-Khaldi S.F., Kirkwood J., Fry F.S., Sedman J., Ismail A.A. Printing microarrays of bacteria for identification by infrared micro spectroscopy // Vibrational Spectroscopy. 2005. V. 38, № 1-2. P. 229-235.
  35. Mordechai S., Mordechai J., Ramesh, J., Levi C., Huleihel M., Erukhimovitch V., Moser A., Kapelushnik J. Application of ftir microspectroscopy for the follow-up of childhood leukaemia chemotherapy. Proceedings of SPIE Subsurface and Surface Sensing Technologies and Applications III. 2001. P. P.243-250.
  36. Pogue B.W., Jiang S.D., Dehghani H., Kogel C., Soho S., Srinivasan S., Song X.M., Tosteson T.D., Poplack S.P., Paulsen K.D. Characterization of hemoglobin, water, and nir scattering in breast tissue: Analysis of intersubject variability and menstrual cycle changes // Journal of Biomedical Optics. 2004. V. 9.№ 3. P. 541-552.
  37. Barry W., Edwards, M., Williams, C. Fourier transform raman and infrared vibrational study of human skin: Assignment of spectral bands // J. of Ram. Spectrosc. 1992. V. 23. № P. 641-645.
  38. Yuan B., Murayama K., Yan H. Study of thermal dynamics of defatted bovine serum albumin in d2o solution by fourier transform infrared spectra and evolving factor analysis // Applied Spectroscopy. 2007. V. 61.№ 9. P. 921-927.
  39. Kasemsumran S., Du Y.P., Murayama K., Huehne M., Ozaki Y. Near-infrared spectroscopic determination of human serum albumin, gamma-globulin, and glucose in a control serum solution with searching combination moving window partial least squares // Analytica Chimica Acta. 2004. V. 512.№ 2. P. 223-230.
  40. Murayama K., Tomida M. Heat-induced secondary structure and conformation change of bovine serum albumin investigated by fourier transform infrared spectroscopy // Biochemistry. 2004.
    V. 43, № 36. P. 11526-11532.
  41. Kasemsumran S., Du Y.P., Murayama K., Huehne M., Ozaki Y. Simultaneous determination of human serum albumin, gamma-globulin, and glucose in a phosphate buffer solution by near-infrared spectroscopy with moving window partial least-squares regression // Analyst. 2003. V. 128.№ 12. P. 1471-1477.
  42. Yuan B., Murayama K., Wu Y.Q., Tsenkova R., Dou X.M., Era S., Ozaki Y. Temperature-dependent near-infrared spectra of bovine serum albumin in aqueous solutions: Spectral analysis by principal component analysis and evolving factor analysis // Applied Spectroscopy. 2003. V. 57.№ 10. P. 1223-1229.
  43. Wu Y.Q., Murayama K., Czarnik-Matusewicz B., Ozaki Y. Two-dimensional attenuated total reflection/infrared correlation spectroscopy studies on concentration and heat-induced structural changes of human serum albumin in aqueous solutions // Applied Spectro­scopy. 2002. V. 56.№ 9. P. 1186-1193.
  44. Murayama K., Wu Y.Q., Czarnik-Matusewicz B., Ozaki Y. Two-dimensional /atten­uated total reflection infrared correlation spectro­scopy studies on secondary structural changes in human serum albumin in aqueous solutions: Ph-dependent structural changes in the secondary structures and in the hydrogen bondings of side chains // Journal of Physical Chemistry B. 2001. V. 105. № 20. P. 4763-4769.
  45. Wu Y.Q., Murayama K., Ozaki Y. Two-dimensional infrared spectroscopy and principle component analysis studies of the secondary structure and kinetics of hydrogen-deuterium exchange of human serum albumin // Journal of Physical Chemistry B. 2001. V. 105. № 26. P. 6251-6259.
  46. Wu Y.Q., Czarnik-Matusewicz B., Murayama K., Ozaki Y. Two-dimensional near-infrared spectro­scopy study of human serum albumin in aqueous solutions: Using overtones and combination modes to monitor temperature-dependent changes in the secondary structure // Journal of Physical Chemistry B. 2000. V. 104. № 24. P. 5840-5847.
  47. Murayama K., Yamada K., Tsenkova R., Wang Y., Ozaki Y. Determination of human serum albumin and gamma-globulin in a control serum solution by near-infrared spectroscopy and partial least squares regression // Fresenius Journal of Analytical Chemistry. 1998. V. 362.№ 1. P. 155-161.
  48. Dorr S., Schade U., Hellwig P. Far infrared spectroscopy on hemoproteins: A model compound study from 1800-100 cm(-1) // Vibrational Spectroscopy. 2008. V. 47.№ 1. P. 59-65.
  49. Helbing J., Bonacina L., Pietri R., Bredenbeck J., Hamm P., van Mourik F., Chaussard F., Gonzalez-Gonzalez A., Chergui M., Ramos-Alvarez C., Ruiz C., Lopez-Garriga J. Time-resolved visible and infrared study of the cyano complexes of myoglobin and of hemoglobin i from lucina pectinata // Biophysical Journal. 2004. V. 87.№ 3. P. 1881-1891.
  50. Katsuyasu S., Shion, I., Makoto, H., Hisashi, M. Noninvasive monitoring of hemoglobin // J. Am. Chem. Soc. 2004. V. 121. № P. 51-55.
  51. Miki A., Nakajima T., Hayakawa Y., Takagi M., Usui T., Abe H., Liu C.S.J., Liu G.T. Time course of hemoglobin concentration changes in human visual cortex during visual stimulation demonstrated by near-infrared spectroscopy // Investigative Ophthalmology & Visual Science. 2004. V. 45. № P. 5479.
  52. Ouyang H., Moore D.J., Sills R.H., Mendelsohn R. Ft-ir studies of sickle hemoglobin interaction with phosphatidylserine // Spectroscopyan Interna­tional Journal. 2004. V. 18.№ 3. P. 407-413.
  53. Saigo K., Imoto S., Hashimoto M., Mito H., Moriya J., Chinzei T., Kubota Y., Numada S., Ozawa T., Kumagai S. Noninvasive monitoring of hemo­globin - the effects of wbc counts on measurement // American Journal of Clinical Pathology. 2004. V. 121. № 1. P. 51-55.
  54. Shimada S., Hiraki K., Matsuda G., Oda I. Decrease in prefrontal hemoglobin oxygenation during reaching tasks with delayed visual feedback: A near-infrared spectroscopy study // Cognitive Brain Research. 2004. V. 20.№ 3. P. 480-490.
  55. Shimada S., Hiraki K., Matsuda G., Oda I. Decrease in prefrontal hemoglobin oxygenation during reaching tasks with delayed visual feedback: A near-infrared spectroscopy study // Brain. Res. Cogn. Brain. Res. 2004. V. 20. № 3. P. 480-490.
  56. Chance Q., Miller L. M., Yeh S. R., Rousseau D. L., Huang R. Characterizition of stedy-state folding intermediates of cytochrome c with fourier transform infrared spectroscopy // Biophysical Journal. 1999. V. 76.№ 1. P. A171-A171.
  57. Choi S.H., Swanson J.M. Interaction of cytochrome-c with cardiolipin - an infrared spectroscopic study // Biophysical Chemistry. 1995. V. 54.№ 3. P. 271-278.
  58. Hielscher R., Wenz T., Hunte C., Hellwig P. Monitoring the redox and protonation dependent
    contributions of cardiolipin in electrochemically induced ftir difference spectra of the cytochrome bc(1) complex from yeast // Biochimica Et Biophysica Acta-Bioenergetics. 2009. V. 1787.№ 6. P. 617-625.
  59. Marinkovic N.S., Chance M.R., Yeh S.R., Adzic A.R., Rousseau D. Infrared studies of cytochrome c folding events // Biophysical Journal. 2000. V. 78.№ 1. P. 1584Plat.
  60. Ye M.P., Zhang Q.L., Li H., Weng Y.X., Wang W.C., Qiu X.G. Infrared spectroscopic discrimination between the loop and alpha-helices and determination of the loop diffusion kinetics by temperature-jump time-resolved infrared spectroscopy for cytochrome c // Biophysical Journal. 2007. V. 93. № P. 2756-2766.
  61. Charbonneau D., Beauregard M., Tajmir-Riahi H.-A. Structural analysis of human serum albumin complexes with cationic lipids // J. Phys. Chem.B. 2009. V. 113.№ 6. P. 1777-1784.
  62. Yuqing W., Murayama, K., Ozaki, Y. Two-dimensional infrared spectroscopy and principle component analysis studies of the secondary structure and kinetics of hydrogen-deuterium exchange of human serum albumin // J. Phys. Chem. 2001. V. 105.№ P. 6251-6259.
  63. 2011. Protein data bank. A resource for studying biological macromolecules. RCSB PDB . Accessed.